I'm deploying an application using the setup.exe file plus some command
line switches.
Is there any way to get the Application object to wait for the install
process to complete before executing the "Run After Termination" script?

At the moment, the "Run before Launching" script executes, then the
setup.exe file is executed, but before the setup.exe file has
terminated, the "Run After Termination" script is executed...